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EFNCRP00000002824 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000002824" - Putative uncharacterized protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000002824Putative uncharacterized protein (545 aa)    
Predicted Functional Partners:
EFNCRP00000008706
Predicted protein (440 aa)
     
 
  0.959
EFNCRP00000003828
Putative uncharacterized protein (234 aa)
     
 
  0.959
pan-4
Pantoate-beta-alanine ligase (361 aa)
         
  0.932
B10H18.190
Putative uncharacterized protein (598 aa)
     
 
  0.608
EFNCRP00000000025
Putative uncharacterized protein (276 aa)
     
 
  0.434
12F11.220
Predicted protein; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (216 aa)
           
  0.400
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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