STRINGSTRING
pmr1 protein (Neurospora crassa) - STRING interaction network
"pmr1" - Calcium-transporting ATPase type 2C member 1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmr1Calcium-transporting ATPase type 2C member 1 (1025 aa)    
Predicted Functional Partners:
EFNCRP00000007868
Putative uncharacterized protein (622 aa)
     
 
  0.664
cax
Putative uncharacterized protein (515 aa)
       
 
  0.660
EFNCRP00000007886
Putative uncharacterized protein (1097 aa)
     
  0.660
cr-1
Adenylate cyclase (2300 aa)
   
 
  0.601
tkl-1
Predicted protein (514 aa)
   
 
  0.594
EFNCRP00000003621
Putative uncharacterized protein (1187 aa)
     
0.586
EFNCRP00000006449
Putative uncharacterized protein (1181 aa)
     
0.586
nca-2
Putative uncharacterized protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1449 aa)
   
 
0.565
B24H17.040
Glutamate synthase (2116 aa)
   
   
  0.553
trk-1
Putative uncharacterized protein (975 aa)
           
  0.545
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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