STRINGSTRING
B13D24.120 protein (Neurospora crassa) - STRING interaction network
"B13D24.120" - Related to Rad50-interacting protein 1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B13D24.120Related to Rad50-interacting protein 1 (782 aa)    
Predicted Functional Partners:
7F4.310
Probable synaptobrevin SEC22 (217 aa)
     
  0.909
EFNCRP00000004130
Putative uncharacterized protein (781 aa)
     
  0.847
EFNCRP00000008957
Putative uncharacterized protein (198 aa)
       
  0.813
EFNCRP00000000343
Putative uncharacterized protein (512 aa)
     
  0.801
EFNCRP00000007140
Coatomer beta’ subunit (858 aa)
     
  0.757
EFNCRP00000001325
Putative uncharacterized protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
  0.725
B13C5.130
Putative uncharacterized protein (1314 aa)
     
 
  0.708
EFNCRP00000002776
Putative uncharacterized protein (302 aa)
     
  0.697
B14D6.450
ER lumen protein retaining receptor (215 aa)
     
 
  0.603
29E8.090
Probable coatomer complex beta chain; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (957 aa)
     
 
    0.597
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (10%) [HD]