STRINGSTRING
wc-1 protein (Neurospora crassa) - STRING interaction network
"wc-1" - White collar 1 protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wc-1White collar 1 protein (1131 aa)    
Predicted Functional Partners:
frq
Frequency clock protein (890 aa)
     
   
  0.857
phy-2
Predicted protein (1022 aa)
     
 
  0.812
B13H18.070
Putative uncharacterized protein (1266 aa)
   
 
  0.792
al-3
Geranylgeranyl pyrophosphate synthetase (433 aa)
           
  0.744
con-10
Conidiation-specific protein 10 (86 aa)
           
  0.656
al-1
Phytoene dehydrogenase (595 aa)
           
  0.652
stk-12
Putative uncharacterized protein (1943 aa)
   
 
  0.638
csp-1
Putative uncharacterized protein (287 aa)
           
  0.624
rrg-2
Putative uncharacterized protein (595 aa)
     
 
  0.623
rrg-1
Putative uncharacterized protein (1114 aa)
     
 
  0.623
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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