STRINGSTRING
rpn-3 protein (Neurospora crassa) - STRING interaction network
"rpn-3" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpn-3Putative uncharacterized protein (552 aa)    
Predicted Functional Partners:
rpn-7
Putative uncharacterized protein (492 aa)
     
  0.999
rpn-2
Putative uncharacterized protein (1188 aa)
     
  0.999
rpn-1
26S proteasome regulatory subunit rpn-1 (902 aa)
     
  0.999
EFNCRP00000001227
Ubiquitin carboxyl-terminal hydrolase (548 aa)
     
  0.999
8D4.170
26S protease regulatory subunit 4 (459 aa)
     
  0.999
rpn-5
Putative uncharacterized protein (494 aa)
     
  0.999
rpn-9
Putative uncharacterized protein (381 aa)
     
  0.999
rpt-4
Putative uncharacterized protein (390 aa)
     
  0.999
B13D24.220
Probable 26S proteasome regulatory particle chain RPT3 (421 aa)
     
  0.999
B10D6.220
26S protease regulatory subunit 7 (439 aa)
     
  0.998
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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