STRINGSTRING
frq protein (Neurospora crassa) - STRING interaction network
"frq" - Frequency clock protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frqFrequency clock protein (890 aa)    
Predicted Functional Partners:
frh
ATP-dependent RNA helicase DOB1 (1106 aa)
           
  0.874
vvd
Putative uncharacterized protein (195 aa)
     
   
  0.870
wc-1
White collar 1 protein (1131 aa)
     
   
  0.857
wc-2
White collar 2 protein (532 aa)
           
  0.857
prd-4
Putative uncharacterized protein (720 aa)
           
  0.779
chol-1
Related to phosphatidyl-ethanolamine N-methyltransferase; Catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis (965 aa)
           
  0.692
fwd-1
Putative uncharacterized protein (906 aa)
           
  0.690
csp-1
Putative uncharacterized protein (287 aa)
           
  0.624
al-3
Geranylgeranyl pyrophosphate synthetase (433 aa)
           
  0.620
ck-1a
Casein kinase I isoform delta (361 aa)
           
  0.549
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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