STRINGSTRING
dim-2 protein (Neurospora crassa) - STRING interaction network
"dim-2" - Cytosine-specific methyltransferase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dim-2Cytosine-specific methyltransferase (1454 aa)    
Predicted Functional Partners:
eth-1
S-adenosylmethionine synthetase (395 aa)
       
  0.907
cys-18
Adenosylhomocysteinase (449 aa)
       
  0.903
dim-5
Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5 (331 aa)
     
  0.900
spe-2
Putative uncharacterized protein (503 aa)
         
    0.900
hda-2
Histone deacetylase phd1 (499 aa)
     
  0.832
EFNCRP00000003512
Ubiquitin carboxyl-terminal hydrolase (1174 aa)
       
 
  0.817
hda-3
Histone deacetylase RPD3 (646 aa)
     
  0.812
set-7
Predicted protein (2140 aa)
     
  0.781
EFNCRP00000008316
Predicted protein (485 aa)
   
  0.780
hH3
Histone H3 (136 aa)
     
  0.780
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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