STRINGSTRING
B11N2.200 protein (Neurospora crassa) - STRING interaction network
"B11N2.200" - Probable small nuclear ribonucleoprotein SM D3 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B11N2.200Probable small nuclear ribonucleoprotein SM D3 (116 aa)    
Predicted Functional Partners:
EFNCRP00000006139
Predicted protein (96 aa)
     
  0.999
EFNCRP00000000695
Small nuclear ribonucleoprotein Sm D1 (123 aa)
     
  0.999
EFNCRP00000003517
Small nuclear ribonucleoprotein Sm D2 (119 aa)
     
  0.999
EFNCRP00000001835
Probable small nuclear ribonucleoprotein F (90 aa)
     
  0.998
EFNCRP00000002157
Predicted protein (213 aa)
     
  0.998
EFNCRP00000009652
Putative uncharacterized protein (85 aa)
     
  0.998
EFNCRP00000007640
Putative uncharacterized protein (478 aa)
     
  0.991
EFNCRP00000006315
U2 small nuclear ribonucleoprotein A’ (252 aa)
     
  0.990
EFNCRP00000007523
Pre-mRNA processing splicing factor 8 (2374 aa)
     
  0.989
B7F18.020
Pre-mRNA splicing factor prp46 (482 aa)
     
  0.988
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (10%) [HD]