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spb-1 protein (Neurospora crassa) - STRING interaction network
"spb-1" - AdoMet-dependent rRNA methyltransferase spb-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spb-1AdoMet-dependent rRNA methyltransferase spb-1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (831 aa)    
Predicted Functional Partners:
EFNCRP00000008050
ATP-dependent RNA helicase dbp-10 (934 aa)
     
 
  0.998
EFNCRP00000002958
Putative uncharacterized protein (550 aa)
     
 
  0.998
B10N12.070
Putative uncharacterized protein (436 aa)
     
 
  0.997
EFNCRP00000000021
ATP-dependent RNA helicase drs-1 (857 aa)
     
 
  0.997
EFNCRP00000005096
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.997
EFNCRP00000002638
Nucleolar protein 58 (597 aa)
     
 
  0.997
EFNCRP00000008633
Putative uncharacterized protein (341 aa)
     
 
  0.997
EFNCRP00000005226
ATP-dependent RNA helicase dbp-4 (823 aa)
     
 
  0.997
EFNCRP00000002202
Putative uncharacterized protein (746 aa)
   
 
  0.996
EFNCRP00000008466
Predicted protein (438 aa)
     
 
  0.996
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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