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EFNCRP00000003569 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000003569" - tRNA in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000003569tRNA (Uridine-2’-O-)-methyltransferase TRM7; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (387 aa)    
Predicted Functional Partners:
EFNCRP00000008050
ATP-dependent RNA helicase dbp-10 (934 aa)
     
 
  0.944
B22K18.070
Putative uncharacterized protein (744 aa)
     
        0.909
B10N12.070
Putative uncharacterized protein (436 aa)
     
 
  0.870
EFNCRP00000005107
Putative uncharacterized protein (1160 aa)
     
   
  0.867
EFNCRP00000000201
Putative uncharacterized protein (1643 aa)
     
 
  0.865
EFNCRP00000008418
Putative uncharacterized protein (433 aa)
     
 
  0.861
EFNCRP00000007401
Predicted protein (1245 aa)
     
 
  0.852
EFNCRP00000006229
Predicted protein (723 aa)
     
        0.851
EFNCRP00000008466
Predicted protein (438 aa)
     
      0.842
EFNCRP00000005035
Putative uncharacterized protein (855 aa)
   
 
  0.801
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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