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EFNCRP00000003736 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000003736" - Ubiquitin ligase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000003736Ubiquitin ligase (Nedd4/Rsp5p) (796 aa)    
Predicted Functional Partners:
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
       
  0.973
ubi::crp-6
Ubiquitin (154 aa)
       
  0.955
EFNCRP00000003261
Ubiquitin carrier protein (147 aa)
     
  0.939
EFNCRP00000007662
Putative uncharacterized protein (995 aa)
     
 
  0.925
EFNCRP00000003722
Putative uncharacterized protein (626 aa)
     
 
  0.921
EFNCRP00000002124
Predicted protein (1175 aa)
       
  0.907
ubi
Ubiquitin (305 aa)
       
  0.864
pre2
Pheromone receptor (566 aa)
         
  0.854
EFNCRP00000003068
Predicted protein (1080 aa)
     
 
  0.834
EFNCRP00000009185
Putative uncharacterized protein (565 aa)
       
 
  0.828
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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