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EFNCRP00000003801 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000003801" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000003801Predicted protein (1104 aa)    
Predicted Functional Partners:
EFNCRP00000007888
Putative uncharacterized protein (519 aa)
     
 
  0.984
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
      0.912
rpn-1
26S proteasome regulatory subunit rpn-1 (902 aa)
     
 
  0.802
EFNCRP00000002006
Pre-mRNA splicing factor ATP-dependent RNA helicase prp16 (1005 aa)
     
      0.753
pcb-6
Proteasome component C5 (265 aa)
       
      0.745
ubi
Ubiquitin (305 aa)
       
  0.712
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
       
  0.709
EFNCRP00000000486
Ubiquitin carboxyl-terminal hydrolase (1754 aa)
     
0.704
EFNCRP00000005801
Ubiquitin carboxyl-terminal hydrolase (788 aa)
     
  0.689
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
     
 
    0.651
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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