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EFNCRP00000003830 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000003830" - Protein rai-1 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000003830Protein rai-1 (330 aa)    
Predicted Functional Partners:
EFNCRP00000001742
5’-3’ exoribonuclease 2 (1072 aa)
     
 
  0.976
EFNCRP00000006679
Putative uncharacterized protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1415 aa)
     
 
  0.938
94C8.120
Predicted protein (392 aa)
     
 
  0.922
EFNCRP00000008466
Predicted protein (438 aa)
       
      0.745
EFNCRP00000000785
Putative uncharacterized protein (257 aa)
     
 
  0.645
EFNCRP00000003069
Related to nucleolar 100K polymyositis-scleroderma protein (822 aa)
     
 
  0.609
EFNCRP00000008239
Putative uncharacterized protein (286 aa)
     
 
  0.532
EFNCRP00000000368
Putative uncharacterized protein (297 aa)
     
      0.512
B1K11.040
Putative uncharacterized protein (391 aa)
       
      0.495
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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