STRINGSTRING
csa protein (Neurospora crassa) - STRING interaction network
"csa" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csaPutative uncharacterized protein (1135 aa)    
Predicted Functional Partners:
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
       
  0.957
EFNCRP00000006198
Putative uncharacterized protein (332 aa)
       
 
  0.862
B15B3.200
Putative uncharacterized protein (138 aa)
       
 
  0.856
B24N4.100
Putative uncharacterized protein (435 aa)
       
  0.777
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.772
mus-40
Putative uncharacterized protein (1269 aa)
     
  0.760
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.744
ngf-1
Histone acetyltransferase GCN5 (422 aa)
     
  0.744
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.734
mus-38
Putative uncharacterized protein (957 aa)
     
  0.733
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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