STRINGSTRING
cac-1 protein (Neurospora crassa) - STRING interaction network
"cac-1" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cac-1Predicted protein (692 aa)    
Predicted Functional Partners:
eth-1
S-adenosylmethionine synthetase (395 aa)
           
  0.582
cys-11
Sulfate adenylyltransferase (573 aa)
           
  0.562
B10H4.020
DNA polymerase (1104 aa)
     
        0.527
msh2
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR) (937 aa)
     
        0.463
EFNCRP00000005439
DNA polymerase (2262 aa)
     
        0.454
EFNCRP00000003631
Putative uncharacterized protein (847 aa)
     
        0.449
EFNCRP00000007172
Putative uncharacterized protein (849 aa)
     
        0.437
EFNCRP00000004253
FACT complex subunit spt-16 (1042 aa)
     
        0.432
EFNCRP00000003182
DNA primase (576 aa)
     
        0.405
EFNCRP00000001202
Chromosome segregation in meiosis protein 3 (409 aa)
     
        0.402
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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