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prd-6 protein (Neurospora crassa) - STRING interaction network
"prd-6" - Regulator of nonsense transcripts 1 homolog in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prd-6Regulator of nonsense transcripts 1 homolog (1093 aa)    
Predicted Functional Partners:
EFNCRP00000005084
Putative uncharacterized protein (1140 aa)
     
  0.995
est1
Predicted protein (1026 aa)
     
  0.951
EFNCRP00000004466
Eukaryotic peptide chain release factor GTP-binding subunit (730 aa)
     
  0.874
EFNCRP00000005527
Phosphatidylinositol 3-kinase tor2 (2509 aa)
     
  0.855
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
  0.839
EFNCRP00000000286
Eukaryotic peptide chain release factor subunit 1 (434 aa)
     
  0.819
EFNCRP00000002674
Predicted protein (822 aa)
     
 
    0.814
EFNCRP00000003775
Putative uncharacterized protein (829 aa)
     
  0.797
EFNCRP00000000327
Nuclear cap binding protein subunit 2 (145 aa)
       
  0.789
EFNCRP00000004337
ATP-dependent RNA helicase fal-1 (400 aa)
   
  0.788
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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