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nmr protein (Neurospora crassa) - STRING interaction network
"nmr" - Nitrogen metabolic regulation protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmrNitrogen metabolic regulation protein (429 aa)    
Predicted Functional Partners:
nit-2
Nitrogen catabolic enzyme regulatory protein (308 aa)
           
  0.764
nit-3
Nitrate reductase [NADPH] (984 aa)
           
  0.742
nit-6
Nitrite reductase [NAD(P)H] (1169 aa)
           
  0.732
nit-4
Nitrogen assimilation transcription factor nit-4 (1051 aa)
           
  0.710
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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