STRINGSTRING
B13O20.070 protein (Neurospora crassa) - STRING interaction network
"B13O20.070" - Probable spliceosome-associated protein SAP-49 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B13O20.070Probable spliceosome-associated protein SAP-49 (390 aa)    
Predicted Functional Partners:
EFNCRP00000000235
Pre-mRNA-splicing factor rse-1 (1192 aa)
     
  0.995
B8B20.080
Related to SPLICEOSOME ASSOCIATED PROTEIN 145 (629 aa)
     
  0.995
EFNCRP00000002417
U2 snRNP component prp10 (1215 aa)
     
  0.994
B15B3.030
Putative uncharacterized protein (96 aa)
     
  0.994
EFNCRP00000000031
Pre-mRNA splicing factor ini1 (108 aa)
     
  0.992
EFNCRP00000007640
Putative uncharacterized protein (478 aa)
     
  0.987
80A10.440
Probable pre-mRNA splicing factor prp1 (917 aa)
     
  0.986
EFNCRP00000007171
Putative uncharacterized protein (247 aa)
     
  0.978
EFNCRP00000004443
Putative uncharacterized protein (497 aa)
     
  0.972
EFNCRP00000001277
Putative uncharacterized protein (535 aa)
     
  0.971
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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