STRINGSTRING
pan-4 protein (Neurospora crassa) - STRING interaction network
"pan-4" - Pantoate-beta-alanine ligase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pan-4Pantoate-beta-alanine ligase (361 aa)    
Predicted Functional Partners:
pan-3
Predicted protein (435 aa)
   
 
  0.956
EFNCRP00000002824
Putative uncharacterized protein (545 aa)
         
  0.932
EFNCRP00000001551
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (309 aa)
 
 
  0.916
EFNCRP00000005443
Putative uncharacterized protein (545 aa)
   
 
    0.909
B11B23.110
Aldehyde dehydrogenase (494 aa)
         
  0.904
EFNCRP00000000147
Aldehyde dehydrogenase (495 aa)
         
  0.904
EFNCRP00000006856
Glutamate decarboxylase (521 aa)
       
    0.903
EFNCRP00000008980
4-aminobutyrate aminotransferase (469 aa)
         
    0.900
EFNCRP00000005071
Probable multifunctional folic acid synthesis protein (471 aa)
   
   
  0.666
EFNCRP00000001319
Predicted protein (550 aa)
   
 
  0.611
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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