STRINGSTRING
B7O17.020 protein (Neurospora crassa) - STRING interaction network
"B7O17.020" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7O17.020Putative uncharacterized protein (324 aa)    
Predicted Functional Partners:
EFNCRP00000007041
Pre-mRNA-splicing factor cef-1 (779 aa)
     
 
  0.983
EFNCRP00000007640
Putative uncharacterized protein (478 aa)
     
 
  0.980
EFNCRP00000006777
Putative uncharacterized protein (543 aa)
     
 
  0.954
B7F18.020
Pre-mRNA splicing factor prp46 (482 aa)
     
 
  0.946
EFNCRP00000008259
Pre-mRNA-splicing factor syf-1 (829 aa)
       
 
  0.936
EFNCRP00000002061
Pre-mRNA-splicing factor clf-1 (695 aa)
     
 
  0.934
99H12.020
Pre-mRNA splicing factor prp45 (569 aa)
     
 
  0.933
EFNCRP00000002006
Pre-mRNA splicing factor ATP-dependent RNA helicase prp16 (1005 aa)
       
 
  0.930
EFNCRP00000000380
Pre-mRNA-splicing factor cwc-22 (795 aa)
       
 
  0.926
EFNCRP00000006315
U2 small nuclear ribonucleoprotein A’ (252 aa)
       
 
  0.925
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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