STRINGSTRING
12F11.030 protein (Neurospora crassa) - STRING interaction network
"12F11.030" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
12F11.030Predicted protein (353 aa)    
Predicted Functional Partners:
EFNCRP00000003660
Related to transcription initiation factor IIE, beta subunit (302 aa)
     
  0.988
EFNCRP00000005257
Related to transcription initiation factor TFIIF large subunit (703 aa)
     
  0.983
EFNCRP00000005533
Putative uncharacterized protein (475 aa)
     
    0.977
EFNCRP00000002492
Predicted protein (345 aa)
     
  0.973
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
     
  0.970
EFNCRP00000007105
Putative uncharacterized protein (348 aa)
     
  0.970
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.969
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.968
EFNCRP00000000209
DNA-directed RNA polymerases I (160 aa)
       
  0.964
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.960
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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