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EFNCRP00000004089 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000004089" - ATP-dependent RNA helicase ded-1 in Neurospora crassa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000004089ATP-dependent RNA helicase ded-1 (584 aa)    
Predicted Functional Partners:
80A10.440
Probable pre-mRNA splicing factor prp1 (917 aa)
     
 
  0.903
EFNCRP00000007041
Pre-mRNA-splicing factor cef-1 (779 aa)
     
      0.901
EFNCRP00000004477
Polyadenylate-binding protein, cytoplasmic and nuclear; Binds the poly(A) tail of mRNA (764 aa)
     
 
  0.740
EFNCRP00000005739
ATP-dependent RNA helicase dbp-3 (614 aa)
   
0.716
prt-1
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (747 aa)
     
 
  0.682
frh
ATP-dependent RNA helicase DOB1 (1106 aa)
     
 
  0.678
EFNCRP00000001852
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 (845 aa)
     
  0.668
cyt19-1
CYT-19 DEAD-box protein (626 aa)
   
0.668
cot-3
Elongation factor 2 (844 aa)
     
 
  0.651
EFNCRP00000007468
Putative uncharacterized protein (1551 aa)
     
 
  0.647
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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