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EFNCRP00000004173 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000004173" - Protein transport protein sec-23 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000004173Protein transport protein sec-23 (772 aa)    
Predicted Functional Partners:
EFNCRP00000006786
Putative uncharacterized protein (1052 aa)
     
  0.999
EFNCRP00000006817
Protein transport protein sec-31 (1256 aa)
     
  0.999
EFNCRP00000003187
Protein transport protein sec-24 (950 aa)
     
  0.999
EFNCRP00000003685
Protein transport protein sec-13 (304 aa)
     
  0.995
EFNCRP00000000290
Small COPII coat GTPase sar-1 (218 aa)
     
  0.975
EFNCRP00000001325
Putative uncharacterized protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
 
  0.948
EFNCRP00000008819
Protein transport protein SEC61 subunit alpha (476 aa)
     
   
  0.937
7F4.310
Probable synaptobrevin SEC22 (217 aa)
     
  0.936
EFNCRP00000008859
Putative uncharacterized protein (353 aa)
     
  0.916
EFNCRP00000002776
Putative uncharacterized protein (302 aa)
     
   
  0.906
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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