STRINGSTRING
oxa-1 protein (Neurospora crassa) - STRING interaction network
"oxa-1" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxa-1Predicted protein (462 aa)    
Predicted Functional Partners:
EFNCRP00000008819
Protein transport protein SEC61 subunit alpha (476 aa)
     
 
  0.913
EFNCRP00000002278
Elongation factor G, mitochondrial (800 aa)
     
   
  0.909
17E5.070
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (437 aa)
     
 
  0.908
oli
ATP synthase subunit 9, mitochondrial (147 aa)
   
 
  0.899
B1K11.100
Putative uncharacterized protein (477 aa)
     
        0.891
EFNCRP00000004994
54S ribosomal protein L4, mitochondrial (263 aa)
     
   
  0.890
B11E5.110
60S ribosomal protein L4, mitochondrial (349 aa)
     
        0.888
tim23
Mitochondrial import inner membrane translocase subunit tim23 (238 aa)
     
 
  0.858
tom40
Mitochondrial import receptor subunit tom-40 (349 aa)
     
 
  0.844
vma-16
Vacuolar ATP synthase 20 kDa proteolipid subunit (200 aa)
   
 
  0.836
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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