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phy-1 protein (Neurospora crassa) - STRING interaction network
"phy-1" - Phytochrome-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phy-1Phytochrome-1 (1536 aa)    
Predicted Functional Partners:
hpt-1
Predicted protein (145 aa)
       
 
  0.818
rrg-2
Putative uncharacterized protein (595 aa)
   
 
  0.633
wc-2
White collar 2 protein (532 aa)
     
   
  0.587
B23L21.130
Related to AP-1-like transcription factor (577 aa)
       
 
  0.568
os-2
Mitogen-activated protein kinase hog-1 (358 aa)
     
 
  0.504
phy-2
Predicted protein (1022 aa)
   
 
0.465
mak-2
Mitogen-activated kinase-2 (354 aa)
       
 
  0.465
hsf-2
Putative uncharacterized protein (557 aa)
     
 
  0.443
nop-1
Opsin-1 (304 aa)
           
  0.440
B24H17.190
Predicted protein (554 aa)
           
  0.421
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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