STRINGSTRING
EFNCRP00000004543 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000004543" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000004543Putative uncharacterized protein (956 aa)    
Predicted Functional Partners:
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
       
  0.973
rpn-11
26S proteasome regulatory subunit (338 aa)
       
  0.947
90C4.210
Putative uncharacterized protein (1845 aa)
     
 
  0.839
pcb-4
Probable proteasome subunit beta type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (240 aa)
       
  0.821
EFNCRP00000009749
Putative uncharacterized protein (1933 aa)
     
 
0.814
ubi
Ubiquitin (305 aa)
       
  0.783
EFNCRP00000000622
Putative uncharacterized protein (891 aa)
     
  0.782
rpn-5
Putative uncharacterized protein (494 aa)
       
  0.777
EFNCRP00000005100
Putative uncharacterized protein (204 aa)
     
  0.771
EFNCRP00000003261
Ubiquitin carrier protein (147 aa)
     
  0.769
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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