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ssp-1 protein (Neurospora crassa) - STRING interaction network
"ssp-1" - Peptidyl-prolyl cis-trans isomerase ssp-1 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssp-1Peptidyl-prolyl cis-trans isomerase ssp-1 (182 aa)    
Predicted Functional Partners:
EFNCRP00000001165
Sorting nexin-3 (142 aa)
       
      0.898
fkr-4
FK506-binding protein 4 (467 aa)
       
 
  0.836
EFNCRP00000006264
Peptidyl-prolyl cis-trans isomerase pin-4 (131 aa)
   
   
  0.780
fkr-3
Peptidyl-prolyl cis-trans isomerase fkr-3 (102 aa)
     
 
  0.752
csr-1
Peptidyl-prolyl cis-trans isomerase, mitochondrial; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (223 aa)
     
 
  0.752
EFNCRP00000007196
Peptidyl-prolyl cis-trans isomerase-like 4 (494 aa)
       
 
  0.745
EFNCRP00000008494
Peptidyl-prolyl isomerase cwc-27 (541 aa)
     
 
  0.680
EFNCRP00000006729
Transcription elongation factor spt-5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1052 aa)
       
 
  0.660
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
       
 
  0.644
EFNCRP00000004948
Acyl-CoA desaturase 1; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates (477 aa)
       
 
  0.598
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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