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tca-15 protein (Neurospora crassa) - STRING interaction network
"tca-15" - Malate dehydrogenase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tca-15Malate dehydrogenase (336 aa)    
Predicted Functional Partners:
cit-1
Citrate synthase, mitochondrial (469 aa)
   
  0.997
EFNCRP00000006852
Probable ATP-citrate synthase subunit 1 (670 aa)
   
  0.995
EFNCRP00000008151
Aspartate aminotransferase (482 aa)
     
  0.990
tca-2
Citrate synthase (470 aa)
   
  0.986
tca-14
Fumarate hydratase, mitochondrial (533 aa)
   
  0.986
EFNCRP00000006460
ATP synthase gamma chain (299 aa)
   
 
  0.978
EFNCRP00000002493
Malic enzyme (611 aa)
   
  0.976
B2F7.120
Malic enzyme (659 aa)
   
  0.972
B14D6.320
Probable ATP citrate lyase subunit 2 (487 aa)
   
  0.971
acu-6
Phosphoenolpyruvate carboxykinase [ATP] (561 aa)
     
 
  0.970
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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