STRINGSTRING
EFNCRP00000005143 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005143" - Putative uncharacterized protein in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005143Putative uncharacterized protein (441 aa)    
Predicted Functional Partners:
stk-47
Putative uncharacterized protein (525 aa)
     
  0.962
B2F7.040
Probable cyclin-dependent ser/thr protein kinase KIN28 (407 aa)
     
  0.910
EFNCRP00000006729
Transcription elongation factor spt-5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1052 aa)
     
  0.888
stk-8
Serine/threonine-protein kinase prk1 (557 aa)
     
  0.886
EFNCRP00000001975
Predicted protein (362 aa)
       
  0.863
EFNCRP00000007589
Serine/threonine-protein kinase bur-1 (504 aa)
     
  0.822
preg
Nuc-1 negative regulatory protein preg (475 aa)
           
  0.816
EFNCRP00000003660
Related to transcription initiation factor IIE, beta subunit (302 aa)
       
  0.734
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.734
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
       
  0.724
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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