STRINGSTRING
29E8.260 protein (Neurospora crassa) - STRING interaction network
"29E8.260" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
29E8.260Predicted protein (935 aa)    
Predicted Functional Partners:
hda-2
Histone deacetylase phd1 (499 aa)
   
  0.952
cel-1
Fatty acid synthase alpha subunit reductase (1864 aa)
       
      0.898
hda-3
Histone deacetylase RPD3 (646 aa)
   
  0.895
EFNCRP00000000234
Putative uncharacterized protein (1561 aa)
     
  0.809
set-3
Predicted protein (1162 aa)
     
   
  0.799
EFNCRP00000007059
Putative uncharacterized protein (581 aa)
       
  0.786
EFNCRP00000003630
41 kDa peptidyl-prolyl cis-trans isomerase (375 aa)
     
  0.779
hda-4
Putative uncharacterized protein (1073 aa)
   
  0.741
set-5
Predicted protein (309 aa)
           
  0.736
EFNCRP00000002609
Putative uncharacterized protein (1919 aa)
     
  0.733
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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