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EFNCRP00000005196 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005196" - ATP-dependent rRNA helicase rrp-3 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005196ATP-dependent rRNA helicase rrp-3 (515 aa)    
Predicted Functional Partners:
EFNCRP00000002202
Putative uncharacterized protein (746 aa)
     
      0.987
B5O22.250
Putative uncharacterized protein B5O22.250 (554 aa)
     
    0.986
EFNCRP00000002745
ATP-dependent rRNA helicase spb-4 (654 aa)
   
 
0.986
spb-1
AdoMet-dependent rRNA methyltransferase spb-1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (831 aa)
     
      0.985
B5O22.240
Putative uncharacterized protein B5O22.240 (817 aa)
     
 
    0.983
EFNCRP00000008418
Putative uncharacterized protein (433 aa)
     
 
    0.978
EFNCRP00000008633
Putative uncharacterized protein (341 aa)
     
        0.976
B11N2.160
Putative uncharacterized protein (922 aa)
     
    0.974
EFNCRP00000009624
Putative uncharacterized protein (200 aa)
     
   
  0.974
G17A4.110
Putative uncharacterized protein (645 aa)
     
        0.974
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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