STRINGSTRING
29E8.010 protein (Neurospora crassa) - STRING interaction network
"29E8.010" - Related to ribosomal protein YmL11, mitochondrial in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
29E8.010Related to ribosomal protein YmL11, mitochondrial (347 aa)    
Predicted Functional Partners:
B1K11.100
Putative uncharacterized protein (477 aa)
     
        0.885
B11E5.110
60S ribosomal protein L4, mitochondrial (349 aa)
     
        0.882
17E5.070
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (437 aa)
     
        0.880
lys-6
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis (784 aa)
     
        0.876
EFNCRP00000004994
54S ribosomal protein L4, mitochondrial (263 aa)
     
        0.876
B24P7.220
Probable pyruvate dehydrogenase (Lipoamide) beta chain (PDB1) (379 aa)
     
        0.872
EFNCRP00000004869
Mitochondrial intermembrane space import and assembly protein 40 (298 aa)
     
        0.869
B7A16.090
Predicted protein (352 aa)
     
        0.869
EFNCRP00000003003
Predicted protein (587 aa)
     
        0.869
EFNCRP00000007595
Putative uncharacterized protein (449 aa)
     
        0.865
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (7%) [HD]