STRINGSTRING
qa-4 protein (Neurospora crassa) - STRING interaction network
"qa-4" - 3-dehydroshikimate dehydratase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qa-43-dehydroshikimate dehydratase (359 aa)    
Predicted Functional Partners:
qa-3
Quinate dehydrogenase (326 aa)
 
 
  0.978
EFNCRP00000005564
Homogentisate 1,2-dioxygenase (467 aa)
         
  0.931
EFNCRP00000008151
Aspartate aminotransferase (482 aa)
         
    0.928
EFNCRP00000006486
Putative uncharacterized protein (560 aa)
         
    0.926
EFNCRP00000006158
Histidinol-phosphate aminotransferase (401 aa)
         
    0.900
qa-Y
Quinate permease (537 aa)
   
   
  0.869
aaa-0q
Catabolic 3-dehydroquinase; Is involved in the catabolism of quinate. Allows the utilization of quinate as carbon source via the beta-ketoadipate pathway (173 aa)
   
 
  0.865
qa-1S
Quinate repressor (919 aa)
     
  0.853
EFNCRP00000001867
4-hydroxyphenylpyruvate dioxygenase (412 aa)
     
    0.818
qa-X
Protein QA-X (340 aa)
     
   
  0.765
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (12%) [HD]