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EFNCRP00000005564 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005564" - Homogentisate 1,2-dioxygenase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005564Homogentisate 1,2-dioxygenase (467 aa)    
Predicted Functional Partners:
EFNCRP00000001867
4-hydroxyphenylpyruvate dioxygenase (412 aa)
   
 
  0.987
EFNCRP00000005641
Fumarylacetoacetase (429 aa)
 
   
  0.935
qa-4
3-dehydroshikimate dehydratase (359 aa)
         
  0.931
EFNCRP00000006754
Putative uncharacterized protein (539 aa)
     
   
  0.834
EFNCRP00000009758
2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial (469 aa)
     
   
  0.830
B23L4.170
Putative uncharacterized protein (1047 aa)
           
  0.750
B22I21.180
Methylcrotonoyl-CoA carboxylase alpha chain, mitochondrial (743 aa)
     
        0.646
EFNCRP00000007670
Putative uncharacterized protein (264 aa)
   
 
  0.561
gst-4
Putative uncharacterized protein (230 aa)
   
 
  0.561
gst-1
Putative uncharacterized protein (236 aa)
   
 
  0.561
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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