STRINGSTRING
asd-1 protein (Neurospora crassa) - STRING interaction network
"asd-1" - Putative rhamnogalacturonase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asd-1Putative rhamnogalacturonase (534 aa)    
Predicted Functional Partners:
EFNCRP00000000246
Putative uncharacterized protein (198 aa)
     
        0.893
EFNCRP00000009316
Predicted protein (314 aa)
     
        0.874
EFNCRP00000008851
Predicted protein (932 aa)
     
        0.869
EFNCRP00000005435
Predicted protein (396 aa)
     
        0.861
EFNCRP00000000210
Predicted protein (265 aa)
     
        0.823
EFNCRP00000000769
Predicted protein (1014 aa)
     
        0.809
EFNCRP00000008562
Predicted protein (236 aa)
     
        0.806
EFNCRP00000008730
Putative uncharacterized protein (604 aa)
     
        0.792
EFNCRP00000000251
Predicted protein (375 aa)
     
        0.784
gh28-1
Polygalacturonase (364 aa)
     
        0.777
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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