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un-25 protein (Neurospora crassa) - STRING interaction network
"un-25" - 60S ribosomal protein L13 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
un-2560S ribosomal protein L13 (214 aa)    
Predicted Functional Partners:
EFNCRP00000002832
60S ribosomal protein L24 (156 aa)
     
  0.999
EFNCRP00000003401
60S ribosomal protein L17 (186 aa)
     
  0.999
EFNCRP00000004263
60S ribosomal protein L16 (202 aa)
     
  0.999
crp-2
40S ribosomal protein S14 (150 aa)
     
  0.999
93G11.150
60S ribosomal protein L4-A (361 aa)
     
  0.999
EFNCRP00000000962
Putative uncharacterized protein (142 aa)
     
  0.999
B11B22.020
Ribosomal protein S8 (202 aa)
     
  0.999
EFNCRP00000009280
40S ribosomal protein S5 (213 aa)
     
  0.999
EFNCRP00000001308
Putative uncharacterized protein (160 aa)
     
  0.999
crp-15
40S ribosomal protein S7 (202 aa)
     
  0.999
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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