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EFNCRP00000005796 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005796" - pH-response regulator protein palA/rim-20 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005796pH-response regulator protein palA/rim-20 (886 aa)    
Predicted Functional Partners:
EFNCRP00000004016
Vacuolar-sorting protein snf-7 (228 aa)
     
  0.991
EFNCRP00000006767
Vacuolar protein sorting-associated protein VPS4 (441 aa)
     
  0.848
EFNCRP00000005762
Predicted protein (580 aa)
     
  0.818
pef-1
Putative uncharacterized protein (311 aa)
       
 
  0.719
EFNCRP00000008460
E3 ubiquitin-protein ligase TOM1-like (4026 aa)
     
  0.693
EFNCRP00000003736
Ubiquitin ligase (Nedd4/Rsp5p) (796 aa)
     
  0.655
B13B7.100
Probable class E vacuolar-protein sorting and endocytosis factor (227 aa)
     
  0.654
EFNCRP00000003718
Vacuolar protein sorting-associated protein 27 (620 aa)
     
 
  0.632
B1K11.190
Putative uncharacterized protein (235 aa)
     
  0.615
ubi
Ubiquitin (305 aa)
     
 
  0.598
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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