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EFNCRP00000005800 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005800" - Predicted protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005800Predicted protein (327 aa)    
Predicted Functional Partners:
gua-3
GMP synthase (537 aa)
   
   
  0.660
EFNCRP00000000005
Putative uncharacterized protein (152 aa)
     
 
  0.587
EFNCRP00000009427
Ribonuclease H2 subunit A; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (381 aa)
     
 
  0.570
20H10.220
Putative uncharacterized protein (690 aa)
   
   
  0.488
EFNCRP00000005039
RNA exonuclease 4 (406 aa)
   
   
  0.488
pan-2
PAB-dependent poly(A)-specific ribonuclease subunit pan-2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by poly(A)-binding protein PAB1, which is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequent 5’-3 [...] (1211 aa)
   
   
  0.488
B16D18.160
Putative uncharacterized protein (716 aa)
   
   
  0.488
EFNCRP00000001455
Predicted protein (420 aa)
   
   
  0.488
EFNCRP00000006105
DNA topoisomerase 2 (1909 aa)
     
 
  0.450
EFNCRP00000000699
Predicted protein (571 aa)
 
            0.439
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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