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EFNCRP00000005801 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000005801" - Ubiquitin carboxyl-terminal hydrolase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000005801Ubiquitin carboxyl-terminal hydrolase (788 aa)    
Predicted Functional Partners:
ubi
Ubiquitin (305 aa)
     
  0.869
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
     
  0.812
ubi::crp-6
Ubiquitin (154 aa)
       
  0.706
B17B1.170
Putative uncharacterized protein (382 aa)
       
  0.696
EFNCRP00000003801
Predicted protein (1104 aa)
     
  0.689
rpn-2
Putative uncharacterized protein (1188 aa)
     
   
  0.687
EFNCRP00000005236
Ubiquitin-activating enzyme E1 (1038 aa)
     
 
  0.635
B18P24.090
Putative uncharacterized protein (431 aa)
     
  0.597
rad23
Putative uncharacterized protein (383 aa)
     
  0.585
EFNCRP00000000486
Ubiquitin carboxyl-terminal hydrolase (1754 aa)
     
 
  0.578
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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