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rco-1 protein (Neurospora crassa) - STRING interaction network
"rco-1" - Transcriptional repressor rco-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rco-1Transcriptional repressor rco-1 (604 aa)    
Predicted Functional Partners:
EFNCRP00000007059
Putative uncharacterized protein (581 aa)
     
  0.940
EFNCRP00000002609
Putative uncharacterized protein (1919 aa)
     
  0.933
set-1
Histone-lysine N-methyltransferase, H3 lysine-4 specific (1150 aa)
     
  0.929
rcm-1
Putative uncharacterized protein (917 aa)
     
  0.906
EFNCRP00000001271
Putative uncharacterized protein (473 aa)
     
0.904
12F11.260
Putative uncharacterized protein (528 aa)
     
  0.847
prd-4
Putative uncharacterized protein (720 aa)
 
 
 
    0.806
EFNCRP00000002975
Predicted protein (528 aa)
     
 
  0.776
set-2
Histone-lysine N-methyltransferase, H3 lysine-36 specific (954 aa)
     
  0.759
3H10.130
Putative uncharacterized protein (1736 aa)
     
  0.741
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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