STRINGSTRING
EFNCRP00000006105 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006105" - DNA topoisomerase 2 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006105DNA topoisomerase 2 (1909 aa)    
Predicted Functional Partners:
EFNCRP00000008929
Putative uncharacterized protein (1650 aa)
     
 
  0.986
EFNCRP00000006483
DNA topoisomerase I (874 aa)
     
 
  0.983
EFNCRP00000000184
Predicted protein (2185 aa)
     
 
  0.982
EFNCRP00000009346
Putative uncharacterized protein; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1249 aa)
     
   
  0.978
qde-3
Putative uncharacterized protein (1955 aa)
   
 
  0.959
EFNCRP00000004253
FACT complex subunit spt-16 (1042 aa)
     
  0.956
EFNCRP00000005942
Putative uncharacterized protein (769 aa)
     
   
  0.956
EFNCRP00000003729
Probable kinetochore protein ndc-80 (746 aa)
     
   
  0.950
EFNCRP00000005998
Putative uncharacterized protein (1262 aa)
     
 
  0.946
EFNCRP00000007902
Putative uncharacterized protein (1117 aa)
     
 
  0.946
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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