STRINGSTRING
EFNCRP00000006115 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006115" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006115Putative uncharacterized protein (1175 aa)    
Predicted Functional Partners:
upr-1
DNA polymerase (1926 aa)
     
 
  0.749
mus-42
Putative uncharacterized protein (1347 aa)
     
      0.688
EFNCRP00000008873
Predicted protein (494 aa)
     
        0.589
qde-3
Putative uncharacterized protein (1955 aa)
   
 
0.557
EFNCRP00000000826
Putative uncharacterized protein (541 aa)
     
        0.535
EFNCRP00000008503
Putative uncharacterized protein (626 aa)
     
      0.477
B10C3.100
Putative uncharacterized protein (612 aa)
   
 
  0.438
EFNCRP00000000390
Putative uncharacterized protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (638 aa)
   
   
  0.434
EFNCRP00000004461
Predicted protein (1089 aa)
     
 
  0.421
EFNCRP00000005439
DNA polymerase (2262 aa)
     
 
  0.405
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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