STRINGSTRING
EFNCRP00000006174 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006174" - ATP-dependent RNA helicase dbp-8 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006174ATP-dependent RNA helicase dbp-8 (626 aa)    
Predicted Functional Partners:
EFNCRP00000003285
Periodic tryptophan protein 2 homolog (899 aa)
     
  0.986
EFNCRP00000000631
ATP-dependent RNA helicase rok-1 (781 aa)
     
 
0.979
EFNCRP00000002476
Putative uncharacterized protein (623 aa)
     
 
  0.978
15E6.070
Related to a component of the yeast U3 snoRNP Rrp9p (629 aa)
     
 
  0.977
EFNCRP00000005196
ATP-dependent rRNA helicase rrp-3 (515 aa)
   
 
0.973
B22K18.070
Putative uncharacterized protein (744 aa)
     
        0.969
B11N2.160
Putative uncharacterized protein (922 aa)
     
 
    0.968
EFNCRP00000008141
Putative uncharacterized protein (556 aa)
     
 
  0.968
spb-1
AdoMet-dependent rRNA methyltransferase spb-1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (831 aa)
     
   
  0.967
B5O22.250
Putative uncharacterized protein B5O22.250 (554 aa)
     
 
  0.967
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (7%) [HD]