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EFNCRP00000006179 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006179" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006179Predicted protein (1386 aa)    
Predicted Functional Partners:
EFNCRP00000009111
ATP-dependent RNA helicase has-1 (578 aa)
     
 
  0.894
B7K22.060
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1701 aa)
     
        0.882
erb-1
Ribosome biogenesis protein erb-1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (779 aa)
     
   
  0.878
EFNCRP00000002638
Nucleolar protein 58 (597 aa)
     
 
  0.858
EFNCRP00000009801
Putative uncharacterized protein (964 aa)
     
        0.855
EFNCRP00000005988
Putative uncharacterized protein (1774 aa)
     
   
  0.849
EFNCRP00000001852
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 (845 aa)
     
        0.841
frh
ATP-dependent RNA helicase DOB1 (1106 aa)
     
        0.840
EFNCRP00000001237
Putative uncharacterized protein (790 aa)
     
   
  0.822
20H10.270
Putative uncharacterized protein (242 aa)
     
      0.819
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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