STRINGSTRING
EFNCRP00000006198 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006198" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006198Putative uncharacterized protein (332 aa)    
Predicted Functional Partners:
B15B3.200
Putative uncharacterized protein (138 aa)
     
 
  0.941
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
     
 
  0.938
csb
Putative uncharacterized protein (1150 aa)
     
 
  0.870
csa
Putative uncharacterized protein (1135 aa)
       
 
  0.862
crf8-1
Putative uncharacterized protein (1893 aa)
     
 
  0.755
EFNCRP00000002908
Predicted protein (397 aa)
       
 
  0.513
EFNCRP00000000388
Putative uncharacterized protein (688 aa)
     
  0.423
hH2B
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
       
 
  0.421
EFNCRP00000007105
Putative uncharacterized protein (348 aa)
     
 
  0.415
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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