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crf3-1 protein (Neurospora crassa) - STRING interaction network
"crf3-1" - SNF2-family ATP dependent chromatin remodeling factor snf21 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crf3-1SNF2-family ATP dependent chromatin remodeling factor snf21 (1455 aa)    
Predicted Functional Partners:
B2N18.250
Related to nucleosome remodeling complex subunit RSC8 (690 aa)
     
  0.974
B13B7.230
Related to transcription factor snf5p (732 aa)
     
  0.968
EFNCRP00000008192
Putative uncharacterized protein (591 aa)
     
  0.965
arp-4
Actin-related protein 4 (469 aa)
     
  0.961
EFNCRP00000002555
Putative uncharacterized protein (483 aa)
     
  0.955
EFNCRP00000006105
DNA topoisomerase 2 (1909 aa)
     
  0.864
B13D24.060
Related to transcription regulator SPT7 (1172 aa)
     
  0.786
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.782
tkl-1
Predicted protein (514 aa)
     
  0.782
EFNCRP00000005865
Transcription elongation factor spt-6 (1407 aa)
   
 
  0.771
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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