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EFNCRP00000006223 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006223" - Rab5-like protein ypt51 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006223Rab5-like protein ypt51 (236 aa)    
Predicted Functional Partners:
EFNCRP00000007115
Putative uncharacterized protein (709 aa)
     
 
  0.943
B13C5.190
Probable GTP-binding protein ypt5 (220 aa)
   
0.926
EFNCRP00000000622
Putative uncharacterized protein (891 aa)
     
  0.906
EFNCRP00000005994
Vacuolar protein sorting-associated protein 45 (590 aa)
     
  0.746
EFNCRP00000002953
Putative uncharacterized protein (490 aa)
       
 
  0.733
EFNCRP00000007750
Putative uncharacterized protein (685 aa)
     
  0.728
EFNCRP00000006767
Vacuolar protein sorting-associated protein VPS4 (441 aa)
     
 
  0.720
EFNCRP00000004945
Rab GDP-dissociation inhibitor (465 aa)
       
 
  0.700
EFNCRP00000002834
Sorting nexin-4 (493 aa)
     
  0.686
G15G9.120
Putative uncharacterized protein (1053 aa)
       
  0.677
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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