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vad-4 protein (Neurospora crassa) - STRING interaction network
"vad-4" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vad-4Predicted protein (1101 aa)    
Predicted Functional Partners:
EFNCRP00000008030
Predicted protein (719 aa)
     
        0.653
EFNCRP00000000245
Predicted protein (627 aa)
     
        0.508
vad-2
Putative uncharacterized protein (734 aa)
           
  0.477
15E6.070
Related to a component of the yeast U3 snoRNP Rrp9p (629 aa)
     
        0.467
99H12.110
Putative uncharacterized protein (1258 aa)
     
        0.458
EFNCRP00000006229
Predicted protein (723 aa)
     
        0.429
EFNCRP00000007077
Putative uncharacterized protein (1057 aa)
     
        0.428
EFNCRP00000006307
ATP-dependent RNA helicase dbp-7 (814 aa)
     
        0.428
65E11.070
Predicted protein (1151 aa)
     
        0.425
EFNCRP00000005961
Putative uncharacterized protein (772 aa)
     
        0.421
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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