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EFNCRP00000006279 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006279" - RER1 protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006279RER1 protein (190 aa)    
Predicted Functional Partners:
atg-8
Autophagy-related protein 8 (121 aa)
       
      0.598
EFNCRP00000000790
Putative uncharacterized protein (187 aa)
       
      0.583
EFNCRP00000001757
ATP synthase subunit 5, mitochondrial (220 aa)
       
      0.578
EFNCRP00000001994
Putative uncharacterized protein (212 aa)
     
 
  0.525
por
Mitochondrial outer membrane protein porin (283 aa)
       
      0.524
atp-1
ATP synthase subunit alpha, mitochondrial (551 aa)
     
      0.521
EFNCRP00000000926
ATP synthase subunit d, mitochondrial (173 aa)
     
      0.511
B23L4.150
Putative uncharacterized protein (565 aa)
       
 
  0.473
EFNCRP00000009364
Phosphatidate cytidylyltransferase (449 aa)
     
      0.448
EFNCRP00000004098
Endoplasmic reticulum vesicle protein 25 (217 aa)
     
 
  0.442
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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