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EFNCRP00000006348 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006348" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006348Putative uncharacterized protein (827 aa)    
Predicted Functional Partners:
EFNCRP00000001124
Putative uncharacterized protein (119 aa)
       
  0.953
EFNCRP00000006679
Putative uncharacterized protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1415 aa)
     
  0.952
EFNCRP00000005369
ATP-dependent RNA helicase dhh-1 (505 aa)
     
  0.952
EFNCRP00000009453
U6 snRNA-associated Sm-like protein LSm6 (105 aa)
       
  0.948
EFNCRP00000008047
Putative uncharacterized protein (130 aa)
     
  0.937
EFNCRP00000009198
Predicted protein (168 aa)
       
  0.934
EFNCRP00000003449
Putative uncharacterized protein (65 aa)
       
  0.931
B7K22.050
Putative uncharacterized protein (489 aa)
     
      0.901
EFNCRP00000001742
5’-3’ exoribonuclease 2 (1072 aa)
       
  0.900
EFNCRP00000002851
Putative uncharacterized protein (526 aa)
       
      0.898
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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